European Bioinformatics Institute
43 papers found
The CAFA challenge reports improved protein function prediction and new functional annotations for hundreds of genes through experimental screens
MetaboLights: a resource evolving in response to the needs of its scientific community
Towards quality assurance and quality control in untargeted metabolomics studies
SIFTS: updated Structure Integration with Function, Taxonomy and Sequences resource allows 40-fold increase in coverage of structure-based annotations for proteins
PhenoMeNal: Processing and analysis of Metabolomics data in the Cloud
STRENDA DB: enabling the validation and sharing of enzyme kinetics data
Automated assembly of species metabolomes through data submission into a public repository
An update on the Enzyme Portal: an integrative approach for exploring enzyme knowledge
UniProt Protein Knowledgebase
Open Targets: a platform for therapeutic target identification and validation.
UniProt-DAAC: Domain Architecture Alignment and Classification, a New Method for Automatic Functional Annotation in UniProtKB
An expanded evaluation of protein function prediction methods shows an improvement in accuracy
Minimizing proteome redundancy in the UniProt Knowledgebase
From data repositories to submission portals: rethinking the role of domain-specific databases in CollecTF
Key challenges for the creation and maintenance of specialist protein resources
Creating a specialist protein resource network: a meeting report for the protein bioinformatics and community resources retreat: Figure 1.
Analysis of the tryptic search space in UniProt databases
The GOA database: Gene Ontology annotation updates for 2015
Representing Kidney Development Using the Gene Ontology
Understanding how and why the Gene Ontology and its annotations evolve: the GO within UniProt
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