John Marioni - Dissemin

Papers authored by John Marioni

This paper is made freely available by the publisher.

2014 Wendy Dean, Julian R. Peat, Stephen J. Clark, Felix Krueger, Sébastien A. Smallwood, Gabriella Ficz, Jong Kyoung Kim, Timothy A. Hore, John C. Marioni

, Wolf Reik

Genome-wide Bisulfite Sequencing in Zygotes Identifies Demethylation Targets and Maps the Contribution of TET3 Oxidation

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Sara G. M. Piccirillo, Inmaculada Spiteri, Andrea Sottoriva, Anestis Touloumis, Suzan Ber, Stephen J. Price, Richard Heywood, Nicola-Jane Francis, Karen D. Howarth, Vincent P. Collins, Ashok R. Venkitaraman, Christina Curtis, John C. Marioni

, Simon Tavare, Colin Watts

Contributions to Drug Resistance in Glioblastoma Derived from Malignant Cells in the Sub-Ependymal Zone

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Benoit Ballester, McLaren Wm, Alejandra Medina-Rivera, Dominic Schmidt, Mar Gonzàlez-Porta, Matthew Carlucci, Xiaoting Chen, Kyle Chessman, Andre J. Faure, Alister Pw W. Funnell, Angela Goncalves, Claudia Kutter

, Faure Aj, Klara Stefflova, Matthew T. Weirauch and 14 other authors

Multi-species, multi-transcription factor binding highlights conserved control of tissue-specific biological pathways

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Antonio Scialdone, Kaia Achim

, John C. Marioni

Single Cell Genomics meeting in Stockholm: from single cells to cell types

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Nuno A. Fonseca, John A. Marioni

, Alvis Brazma

RNA-Seq Gene Profiling - A Systematic Empirical Comparison

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Jean-Baptiste Pettit, Raju Tomer, Kaia Achim

, Sylvia Richardson, Lamiae Azizi, John Marioni

Identifying Cell Types from Spatially Referenced Single-Cell Expression Datasets

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Bianca M. Schmitt, Konrad L. M. Rudolph, Panagiota Karagianni, Nuno A. Fonseca, Robert J. White, Iannis Talianidis, Duncan T. Odom, John C. Marioni

, Claudia Kutter

High-resolution mapping of transcriptional dynamics across tissue development reveals a stable mRNA–tRNA interface

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This paper is available in a repository.

Veli Vural Uslu, Massimo Petretich, Sandra Ruf, Katja Langenfeld, Nuno A. Fonseca, John C. Marioni

, François Spitz

Long-range enhancers regulating Myc expression are required for normal facial morphogenesis

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Mélanie A. Eckersley-Maslin, David Thybert

, Jan H. Bergmann, John C. Marioni

, Paul Flicek, David L. Spector

Random Monoallelic Gene Expression Increases upon Embryonic Stem Cell Differentiation

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2013 Robert Petryszak, Tony Burdett, Benedetto Fiorelli, Nuno A. Fonseca, Mar Gonzalez-Porta, Emma Hastings

, Wolfgang Huber, Simon Jupp

, Maria Keays, Nataliya Kryvych, Julie McMurry

, John C. Marioni

, James Malone, Karine Megy, Gabriella Rustici and 6 other authors

Expression Atlas update—a database of gene and transcript expression from microarray- and sequencing-based functional genomics experiments

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Klara Stefflova, David Thybert

, Michael D. Wilson, Ian Streeter, Jelena Aleksic, Panagiota Karagianni, Alvis Brazma, David J. Adams, Iannis Talianidis, John C. Marioni

, Paul Flicek, Duncan T. Odom

Cooperativity and Rapid Evolution of Cobound Transcription Factors in Closely Related Mammals

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H. C. Whitaker, D. Patel, W. J. Howat, A. Y. Warren, J. D. Kay, T. Sangan, J. C. Marioni

, J. Mitchell, S. Aldridge, H. J. Luxton, C. Massie

, A. G. Lynch, D. E. Neal

Peroxiredoxin-3 is overexpressed in prostate cancer and promotes cancer cell survival by protecting cells from oxidative stress

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Andrea Sottoriva, Inmaculada Spiteri, Sara G. M. Piccirillo, Piccirillo Sg, Anestis Touloumis, V. Peter Collins, Collins Vp, V. Peter Collins, Marioni Jc, John C. Marioni

, Christina Curtis

, Colin Watts, Simon Tavaré

Intratumor heterogeneity in human glioblastoma reflects cancer evolutionary dynamics

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Jong Kyoung Kim, John C. Marioni

Inferring the kinetics of stochastic gene expression from single-cell RNA-sequencing data

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Jean-Baptiste Pettit, John C. Marioni

bioWeb3D: an online webGL 3D data visualisation tool

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2012 Nuno A. Fonseca, Johan Rung, Alvis Brazma, John C. Marioni

Tools for mapping high-throughput sequencing data

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Angela Goncalves, Sarah Leigh-Brown, David Thybert

, Klara Stefflova, Ernest Turro

, Paul Flicek, Alvis Brazma, Duncan T. Odom

, John C. Marioni

Extensive compensatory cis-trans regulation in the evolution of mouse gene expression

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2011 George H. Perry, Páll Melsted, John C. Marioni

, Ying Wang, Russell Bainer, Joseph K. Pickrell, Katelyn Michelini, Sarah Zehr, Anne D. Yoder, Matthew Stephens, Jonathan K. Pritchard, Yoav Gilad

Comparative RNA sequencing reveals substantial genetic variation in endangered primates

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This paper was not found in any repository, but could be made available legally by the author.

X. Y. Goh, J. R. E. Rees

, A. L. Paterson, S. F. Chin, J. C. Marioni

, V. Save, M. O'Donovan, P. P. Eijk, D. Alderson, B. Ylstra

, C. Caldas, R. C. Fitzgerald

Integrative analysis of array-comparative genomic hybridisation and matched gene expression profiling data reveals novel genes with prognostic significance in oesophageal adenocarcinoma

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Carolyn E. Cain, Ran Blekhman, John C. Marioni

, Yoav Gilad

Gene Expression Differences Among Primates Are Associated With Changes in a Histone Epigenetic Modification

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Papers authored by John Marioni