Peggy Farnham - Dissemin

All papers authored by Peggy Farnham

This paper is made freely available by the publisher.

2015 Yu Gyoung Tak, Peggy J. Farnham

Making sense of GWAS: using epigenomics and genome engineering to understand the functional relevance of SNPs in non-coding regions of the human genome

Download from dx.doi.org

Schahram Akbarian, Chunyu Liu, James A. Knowles, Flora M. Vaccarino

, Peggy J. Farnham

, Gregory E. Crawford, Andrew E. Jaffe, Dalila Pinto, Stella Dracheva, Daniel H. Geschwind, Jonathan Mill, Angus C. Nairn, Alexej Abyzov, Sirisha Pochareddy, Shyam Prabhakar and 69 other authors

The PsychENCODE project

Download from www.nature.com

Lijing Yao, Benjamin P. Berman, Peggy J. Farnham

Demystifying the secret mission of enhancers: Linking distal regulatory elements to target genes

Download from www.tandfonline.com

Lijing Yao, Hui Shen, Peter W. Laird, Peggy J. Farnham

, Benjamin P. Berman

Inferring regulatory element landscapes and transcription factor networks from cancer methylomes

Download from dx.doi.org

Fides D. Lay, Yaping Liu, Theresa K. Kelly, Heather Witt, Peggy J. Farnham

, Peter A. Jones, Benjamin P. Berman

The role of DNA methylation in directing the functional organization of the cancer epigenome

Download from genome.cshlp.org

Philippe Gascard, Misha Bilenky, Mahvash Sigaroudinia, Jianxin Zhao, Luolan Li, Annaick Carles, Allen Delaney, Angela Tam, Baljit Kamoh, Stephanie Cho, Malachi Griffith, Andy Chu, Gordon Robertson, Dorothy Cheung, Irene Li and 27 other authors

Epigenetic and transcriptional determinants of the human breast

Download from www.nature.com

GiNell Elliott, Chibo Hong, Xiaoyun Xing, Xin Zhou, Daofeng Li, Cristian Coarfa, Robert J. A. Bell, Cecile L. Maire, Keith L. Ligon, Mahvash Sigaroudinia, Philippe Gascard, Thea D. Tlsty, R. Alan Harris, R. Alan Harris

, Leonard C. Schalkwyk

and 10 other authors

Intermediate DNA methylation is a conserved signature of genome regulation

Download from www.nature.com

Roadmap Epigenomics Consortium, Philip L. de Jager, Anshul Kundaje, Wouter Meuleman, Zhizhuo Zhang, Jason Ernst, Xian Zhang, Misha Bilenky, Angela Yen, Alireza Heravi-Moussavi, Jianrong Wang, Pouya Kheradpour, Xiaolan Zhang, Xinchen Wang, Michael J. Ziller and 252 other authors

Integrative analysis of 111 reference human epigenomes

Download from www.nature.com

Yu Gyoung Tak, Yuli Hung, Lijing Yao, Matthew R. Grimmer, Albert Do, Mital S. Bhakta, Henriette O'Geen, David J. Segal, Henriette O. 'geen, Peggy J. Farnham

Effects on the transcriptome upon deletion of a distal element cannot be predicted by the size of the H3K27Ac peak in human cells

Download from dx.doi.org

Malaina Gaddis, Diana Gerrard, Seth Frietze, Peggy J. Farnham

Altering cancer transcriptomes using epigenomic inhibitors

Download from dx.doi.org

2014 Rebecca F. Lowdon, Bo Zhang, Misha Bilenky, Thea Mauro, Daofeng Li, Philippe Gascard, Mahvash Sigaroudinia, Peggy J. Farnham

, Boris C. Bastian, Thea D. Tlsty, Marco A. Marra, Martin Hirst, Joseph F. Costello, Ting Wang, Jeffrey B. Cheng

Regulatory Network Decoded from Epigenomes of Surface Ectoderm-Derived Cell Types

Download from dx.doi.org

This paper is available in a repository.

Matthew R. Grimmer, Peggy J. Farnham

Can genome engineering be used to target cancer-associated enhancers?

Download from europepmc.org

Lijing Yao, Yu Gyoung Tak, Benjamin P. Berman, Peggy J. Farnham

Functional annotation of colon cancer risk SNPs

Download from dx.doi.org

Adam Blattler, Lijing Yao, Heather Witt, Yu Guo, Charles M. Nicolet, Benjamin P. Berman, Peggy J. Farnham

Global loss of DNA methylation uncovers intronic enhancers in genes showing expression changes

Download from dx.doi.org

Matthew R. Grimmer, Sabine Stolzenburg, Ethan Ford, Ryan Lister, Pilar Blancafort, Peggy J. Farnham

Analysis of an artificial zinc finger epigenetic modulator: widespread binding but limited regulation

Download from dx.doi.org

Manolis Kellis, Barbara Wold, Michael P. Snyder, Bradley E. Bernstein, Anshul Kundaje, Georgi K. Marinov, Ewan Birney

, Lucas D. Ward, Gregory E. Crawford, Job Dekker, Ian Dunham

, Laura L. Elnitski, Peggy J. Farnham

, Elise A. Feingold, Mark Gerstein and 15 other authors

Reply to Brunet and Doolittle: Both selected effect and causal role elements can influence human biology and disease

Download from www.pnas.org

Manolis Kellis, Barbara Wold, Michael P. Snyder, Bradley E. Bernstein, Anshul Kundaje, Georgi K. Marinov, Lucas D. Ward, Ewan Birney

, Gregory E. Crawford, Job Dekker, Ian Dunham

, Laura L. Elnitski, Peggy J. Farnham

, Elise A. Feingold, Mark Gerstein and 16 other authors

Defining functional DNA elements in the human genome

Download from doi.org

Seth Frietze, Henriette O’Geen, Laurie E. Littlepage, Catalina Simion, Colleen A. Sweeney, Peggy J. Farnham

, Sheryl R. Krig

Global analysis of ZNF217 chromatin occupancy in the breast cancer cell genome reveals an association with ERalpha

Download from dx.doi.org

2013 Adam Blattler, Peggy J. Farnham

Cross-talk between Site-specific Transcription Factors and DNA Methylation States*

Download from www.jbc.org

Hilde Schjerven

, Jami McLaughlin, Teresita L. Arenzana, Seth Frietze, Donghui Cheng, Sarah E. Wadsworth, Gregory W. Lawson, Steven J. Bensinger, Peggy J. Farnham

, Owen N. Witte, Stephen T. Smale

Selective regulation of lymphopoiesis and leukemogenesis by individual zinc fingers of Ikaros

Download from www.ncbi.nlm.nih.gov

Missing publications? Search for publications with a matching author name.

Researcher

Statistics

Refine

All papers authored by Peggy Farnham