All papers authored by Björn Grüning
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Arina Rybina ,
Jean‐Marie Burel ,
Jean‐Karim Heriche ,
Pauline Audergon ,
Jan‐Willem Boiten ,
Frederik Coppens ,
Sara Crockett ,
Katrina Exter ,
Sven Fahrner ,
Maddalena Fratelli ,
Carole Goble ,
Philipp Gormanns ,
Tobias Grantner ,
Björn Grüning
and 44 other authors
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Kevin Schneider ,
Marcel Tschöpe ,
Jonathan Bauer ,
Oliver Maus ,
Kevin Frey ,
Dominik Brilhaus ,
Cristina Martins Rodrigues ,
Gajendra Doniparthi ,
Florian Wetzels ,
Jonas Lukasczyk ,
Angela Kranz ,
Björn Grüning ,
David Zimmer ,
Stefan Deßloch
and 4 other authors
PLANTdataHUB: a collaborative platform for continuous FAIR data sharing in plant research
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Finn Bacall,
Stian Soiland-Reyes,
Stuart Owen,
Ignacio Eguinoa,
Bert Droesbeke,
Hervé Ménager,
Laura Rodriguez-Navas,
José M. Fernández ,
Björn Grüning ,
Simone Leo,
Luca Pireddu ,
Michael Crusoe ,
Johan Gustafsson,
Salvador Capella-Gutierrez
and 1 other authors
EOSC-Life Workflow Collaboratory for the Life Sciences
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Cameron Hyde ,
John Davis ,
Simon Gladman ,
Nate Coraor ,
Anthony Bretaudeau ,
Gianmauro Cuccuru ,
Wendi Bacon ,
Beatriz Serrano-Solano ,
Jennifer Hillman-Jackson ,
Saskia Hiltemann ,
Miaomiao Zhou ,
Björn Grüning ,
Andrew Stubbs
Training Infrastructure as a Service
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Peter Sefton ,
Mercè Crosas ,
Leyla Jael Castro ,
Frederik Coppens ,
José M. Fernández ,
Daniel Garijo ,
Björn Grüning ,
Marco La Rosa ,
Simone Leo ,
Eoghan Ó. Carragáin ,
Marc Portier ,
Ana Trisovic ,
Ro-Crate Community,
Paul Groth
and 1 other authors
Packaging research artefacts with RO-Crate
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Julianus Pfeuffer,
Elizaveta M. Solovyeva ,
Jingwen Deng,
Pablo Moreno ,
Selvakumar Kamatchinathan,
Deepti Jaiswal Kundu,
Nancy George ,
Silvie Fexova,
Björn Grüning ,
Melanie Christine Föll,
Johannes Griss ,
Marc Vaudel ,
Enrique Audain
and 25 other authors
A proteomics sample metadata representation for multiomics integration and big data analysis
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Simon Bray ,
Allison Creason ,
Alireza Khanteymoori ,
Vahid Jalili ,
Björn Grüning ,
Jeremy Goecks
Galaxy-ML: An accessible, reproducible, and scalable machine learning toolkit for biomedicine
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Bjoern Gruening ,
Thomas McGowan,
An Nguyen,
Andrew T. Rajczewski,
James E. Johnson,
Timothy J. Griffin ,
Dennis W. Wolan ,
Pratik D. Jagtap
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Frederique Lisacek,
Caleb Easterly ,
Michael Riffle ,
Bart Mesuere ,
Thilo Muth ,
Subina Mehta ,
Praveen Kumar ,
James Johnson ,
Bjoern Andreas Gruening ,
Henning Schiebenhoefer ,
Carolin A. Kolmeder,
Stephan Fuchs ,
Brook L. Nunn ,
Joel Rudney
and 2 other authors
Survey of metaproteomics software tools for functional microbiome analysis
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Milad Miladi ,
Saskia Hiltemann ,
Astrid Heikema ,
John P. Hays ,
Stephan Flemming,
Marius van den Beek ,
Dana A. Mustafa ,
Rolf Backofen ,
Björn Grüning ,
Andrew P. Stubbs
NanoGalaxy: Nanopore long-read sequencing data analysis in Galaxy
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Bérénice Batut ,
Alexander Ostrovsky ,
Christophe Antoniewski ,
Dave Clements ,
Fidel Ramirez ,
Graham J. Etherington ,
Hans-Rudolf Hotz ,
Jelle Scholtalbers ,
Jonathan R. Manning ,
Lea Bellenger ,
Maria A. Doyle ,
Mohammad Heydarian ,
Ni Huang ,
Nicola Soranzo
and 8 other authors
A single-cell RNA-sequencing training and analysis suite using the Galaxy framework
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Eteri Sokhoyan,
Torsten Houwaart ,
Steffen Heyne ,
Fabrizio Costa ,
Björn Grüning ,
Rolf Backofen
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Lennart Moritz,
Thomas Wollmann ,
Maren Nicole Stillger,
Niklas Vockert,
Martin Werner,
Peter Bronsert,
Karl Rohr,
Björn Andreas Grüning ,
Oliver Schilling
Accessible and reproducible mass spectrometry imaging data analysis in Galaxy
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Pavankumar Videm ,
Andrea Bagnacani ,
Bérénice Batut ,
Maria A. Doyle ,
Tomas Klingstrom ,
Florian Eggenhofer ,
Peter F. Stadler ,
Rolf Backofen ,
Björn Grüning
The RNA workbench 2.0: next generation RNA data analysis
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Samuel Lampa ,
Marc Vaudel ,
Daniel Blankenberg
Software engineering for scientific big data analysis
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Luca Pireddu ,
Pierrick Roger ,
Nuwan Goonasekera,
Enis Afgan ,
Marius van den Beek ,
Sijin He ,
Anders Larsson ,
Christoph Ruttkies ,
Daniel Schober ,
David Johnson ,
Philippe Rocca-Serra ,
Ralf Jm M. Weber ,
Bjoern Gruening ,
Reza M. Salek
and 5 other authors
Galaxy-Kubernetes integration: scaling bioinformatics workflows in the cloud
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Aysam Guerler,
Jennifer Hillman-Jackson,
Saskia Hiltemann,
Vahid Jalili,
Helena Rasche
and 5 other authors
The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update
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Saskia Hiltemann ,
Andrea Bagnacani ,
Dannon Baker ,
Vivek Bhardwaj,
Clemens Blank ,
Anthony Bretaudeau ,
Loraine Brillet-Guéguen,
Loraine Guéguen ,
Martin Čech ,
John Chilton ,
Dave Clements ,
Olivia Doppelt-Azeroual ,
Anika Erxleben ,
Mallory Ann Freeberg
and 24 other authors
Community-driven data analysis training for biology
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