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Oxford University Press (OUP), Bioinformatics, 19(25), p. 2607-2608

DOI: 10.1093/bioinformatics/btp450

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ShortRead: a bioconductor package for input, quality assessment and exploration of high-throughput sequence data

This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

Summary: ShortRead is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.