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Oxford University Press (OUP), Bioinformatics, 7(28), p. 1042-1044

DOI: 10.1093/bioinformatics/bts049

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xQTL workbench: a scalable web environment for multi-level QTL analysis

Journal article published in 2012 by Danny Arends, K. Joeri van der Velde ORCID, K. Joeri van der Velde, Pjotr Prins, Karl W. Broman, Steffen Möller, Ritsert C. Jansen, Morris A. Swertz
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

Summary: xQTL workbench is a scalable web platform for the mapping of quantitative trait loci (QTLs) at multiple levels: for example gene expression (eQTL), protein abundance (pQTL), metabolite abundance (mQTL) and phenotype (phQTL) data. Popular QTL mapping methods for model organism and human populations are accessible via the web user interface. Large calculations scale easily on to multi-core computers, clusters and Cloud. All data involved can be uploaded and queried online: markers, genotypes, microarrays, NGS, LC-MS, GC-MS, NMR, etc. When new data types come available, xQTL workbench is quickly customized using the Molgenis software generator.