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American Chemical Society, Journal of Chemical Theory and Computation, 12(9), p. 5450-5459, 2013

DOI: 10.1021/ct400803f

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Leveraging Symmetries of Static Atomic Multipole Electrostatics in Molecular Dynamics Simulations

Journal article published in 2013 by Tristan Bereau ORCID, Christian Kramer, Markus Meuwly
This paper is available in a repository.
This paper is available in a repository.

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Abstract

Multipole (MTP) electrostatics provides the means to describe anisotropic interactions in a rigorous and systematic manner. A number of earlier molecular dynamics (MD) implementations have increasingly relied on the use of molecular symmetry to reduce the (possibly large) number of MTP interactions. Here, we present a CHARMM implementation of MTP electrostatics in terms of spherical harmonics. By relying on a systematic set of reference-axis systems tailored to various chemical environments, we obtain an implementation that is both efficient and scalable for (bio)molecular systems. We apply the method to a series of halogenated compounds to show (i) energy conservation; (ii) improvements in reproducing thermodynamic properties compared to standard point-charge (PC) models; (iii) perform-ance of the code; and (iv) better stabilization of a brominated ligand in a target protein, compared to a PC force field. The implementation provides interesting perspectives toward a dual PC/ MTP resolution, à la QM/MM.