Dissemin is shutting down on January 1st, 2025

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Nature Research, Scientific Reports, 1(12), 2022

DOI: 10.1038/s41598-022-22695-y

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Discovering HIV related information by means of association rules and machine learning

Journal article published in 2022 by Juan Martinez-Romo, José Sánchez-Payá, Diego Torrus, Guillermo Telenti, Arantza Sanvisens, Francisco Tejerina, Francesc Vidal, Consuelo Viladés, Montserrat Vargas, Elena Yeregui, María Tasias, Inmaculada Segarra, Tomás Suarez-Zarracina, Rosa de Miguel, Elena Sendagorta and other authors.
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

AbstractAcquired immunodeficiency syndrome (AIDS) is still one of the main health problems worldwide. It is therefore essential to keep making progress in improving the prognosis and quality of life of affected patients. One way to advance along this pathway is to uncover connections between other disorders associated with HIV/AIDS—so that they can be anticipated and possibly mitigated. We propose to achieve this by using Association Rules (ARs). They allow us to represent the dependencies between a number of diseases and other specific diseases. However, classical techniques systematically generate every AR meeting some minimal conditions on data frequency, hence generating a vast amount of uninteresting ARs, which need to be filtered out. The lack of manually annotated ARs has favored unsupervised filtering, even though they produce limited results. In this paper, we propose a semi-supervised system, able to identify relevant ARs among HIV-related diseases with a minimal amount of annotated training data. Our system has been able to extract a good number of relationships between HIV-related diseases that have been previously detected in the literature but are scattered and are often little known. Furthermore, a number of plausible new relationships have shown up which deserve further investigation by qualified medical experts.