Researcher
Sofie Salama
University of California Santa Cruz
Statistics
53 papers found
All papers authored by Sofie Salama
Refreshing results…
2022
Lauren M. Sanders 
,
Rahul Chandra,
Navid Zebarjadi,
Holly C. Beale ,
A. Geoffrey Lyle ,
Analiz Rodriguez,
Ellen Towle Kephart ,
Jacob Pfeil ,
Allison Cheney ,
Rob Currie ,
Katrina Learned,
Leonid Gitlin,
David Vengerov,
David Haussler ,
Sofie R. Salama
and 2 other authors
Download from www.nature.com
,
Rahul Chandra,
Navid Zebarjadi,
Holly C. Beale ,
A. Geoffrey Lyle ,
Analiz Rodriguez,
Ellen Towle Kephart ,
Jacob Pfeil ,
Allison Cheney ,
Rob Currie ,
Katrina Learned,
Leonid Gitlin,
David Vengerov,
David Haussler ,
Sofie R. Salama
and 2 other authors
Download from www.nature.com
Spencer T. Seiler,
Liam Tran,
Gary L. Mantalas,
John Selberg,
Sergio Cordero,
Pierre V. Baudin ,
Victoria T. Ly,
Finn Amend,
Ryan N. Hoffman,
Sebastian Torres-Montoya ,
Marco Rolandi,
Richard E. Green,
David Haussler ,
Sofie R. Salama ,
Mircea Teodorescu
Download from doi.org
,
Victoria T. Ly,
Finn Amend,
Ryan N. Hoffman,
Sebastian Torres-Montoya ,
Marco Rolandi,
Richard E. Green,
David Haussler ,
Sofie R. Salama ,
Mircea Teodorescu
Download from doi.org
David F. Parks ,
Kateryna Voitiuk ,
Jinghui Geng ,
Matthew A. T. Elliott ,
Matthew G. Keefe ,
Erik A. Jung,
Ash Robbins ,
Pierre V. Baudin ,
Victoria T. Ly ,
Nico Hawthorne ,
Dylan Yong,
Sebastian E. Sanso,
Nick Rezaee,
Jess L. Sevetson ,
Spencer T. Seiler
and 8 other authors
,
Kateryna Voitiuk ,
Jinghui Geng ,
Matthew A. T. Elliott ,
Matthew G. Keefe ,
Erik A. Jung,
Ash Robbins ,
Pierre V. Baudin ,
Victoria T. Ly ,
Nico Hawthorne ,
Dylan Yong,
Sebastian E. Sanso,
Nick Rezaee,
Jess L. Sevetson ,
Spencer T. Seiler
and 8 other authors
IoT cloud laboratory: Internet of Things architecture for cellular biology
Upload
Tomasz J. Nowakowski ,
Sofie R. Salama
,
Sofie R. Salama
Cerebral Organoids as an Experimental Platform for Human Neurogenomics
Download from doi.org
Nicolas Altemose ,
Pragya Sidhwani ,
Lev Uralsky ,
Fedor D. Ryabov ,
Colin J. Shew,
Michael E. G. Sauria ,
Valery A. Shepelev,
Mitchell R. Vollger ,
Arang Rhie ,
Glennis A. Logsdon ,
Kishwar Shafin ,
Andrey V. Bzikadze ,
Daniel Olson ,
Sasha A. Langley,
Leonardo Gomes de Lima
and 46 other authors
,
Pragya Sidhwani ,
Lev Uralsky ,
Fedor D. Ryabov ,
Colin J. Shew,
Michael E. G. Sauria ,
Valery A. Shepelev,
Mitchell R. Vollger ,
Arang Rhie ,
Glennis A. Logsdon ,
Kishwar Shafin ,
Andrey V. Bzikadze ,
Daniel Olson ,
Sasha A. Langley,
Leonardo Gomes de Lima
and 46 other authors
Complete genomic and epigenetic maps of human centromeres
Upload
2021
Megan R. Reed ,
A. Geoffrey Lyle ,
Annick De Loose,
Leena Maddukuri,
Katrina Learned ,
Holly C. Beale,
Ellen T. Kephart ,
Allison Cheney ,
Anouk van den Bout,
Madison P. Lee,
Kelsey N. Hundley,
Ashley M. Smith ,
Teresa M. DesRochers,
Cecile Rose T. Vibat ,
Murat Gokden
and 5 other authors
Download from doi.org
,
A. Geoffrey Lyle ,
Annick De Loose,
Leena Maddukuri,
Katrina Learned ,
Holly C. Beale,
Ellen T. Kephart ,
Allison Cheney ,
Anouk van den Bout,
Madison P. Lee,
Kelsey N. Hundley,
Ashley M. Smith ,
Teresa M. DesRochers,
Cecile Rose T. Vibat ,
Murat Gokden
and 5 other authors
Download from doi.org
Victoria T. Ly ,
Pierre V. Baudin,
Pattawong Pansodtee,
Erik A. Jung,
Kateryna Voitiuk ,
Yohei M. Rosen,
Helen Rankin Willsey,
Gary L. Mantalas,
Spencer T. Seiler,
John A. Selberg,
Sergio A. Cordero,
Jayden M. Ross,
Marco Rolandi,
Alex A. Pollen ,
Tomasz J. Nowakowski
and 4 other authors
,
Pierre V. Baudin,
Pattawong Pansodtee,
Erik A. Jung,
Kateryna Voitiuk ,
Yohei M. Rosen,
Helen Rankin Willsey,
Gary L. Mantalas,
Spencer T. Seiler,
John A. Selberg,
Sergio A. Cordero,
Jayden M. Ross,
Marco Rolandi,
Alex A. Pollen ,
Tomasz J. Nowakowski
and 4 other authors
Picroscope: low-cost system for simultaneous longitudinal biological imaging
Download from doi.org
Pierre V. Baudin ,
Victoria T. Ly ,
Pattawong Pansodtee,
Erik A. Jung ,
Robert Currie ,
Ryan Hoffman,
Helen Rankin Willsey ,
Alex A. Pollen,
Tomasz J. Nowakowski,
David Haussler ,
Mohammed A. Mostajo-Radji ,
Sofie R. Salama ,
Mircea Teodorescu
,
Victoria T. Ly ,
Pattawong Pansodtee,
Erik A. Jung ,
Robert Currie ,
Ryan Hoffman,
Helen Rankin Willsey ,
Alex A. Pollen,
Tomasz J. Nowakowski,
David Haussler ,
Mohammed A. Mostajo-Radji ,
Sofie R. Salama ,
Mircea Teodorescu
Low cost cloud based remote microscopy for biological sciences
Upload
Yafei Mao ,
Claudia R. Catacchio ,
LaDeana W. Hillier,
David Porubsky ,
Ruiyang Li,
Arvis Sulovari ,
Jason D. Fernandes,
Francesco Montinaro,
David S. Gordon,
Jessica M. Storer,
Marina Haukness ,
Ian T. Fiddes,
Shwetha Canchi Murali,
Philip C. Dishuck,
PingHsun Hsieh
and 24 other authors
,
Claudia R. Catacchio ,
LaDeana W. Hillier,
David Porubsky ,
Ruiyang Li,
Arvis Sulovari ,
Jason D. Fernandes,
Francesco Montinaro,
David S. Gordon,
Jessica M. Storer,
Marina Haukness ,
Ian T. Fiddes,
Shwetha Canchi Murali,
Philip C. Dishuck,
PingHsun Hsieh
and 24 other authors
A high-quality bonobo genome refines the analysis of hominid evolution
Download from www.nature.com
Holly C. Beale ,
Jacquelyn M. Roger ,
Matthew A. Cattle ,
Liam T. McKay ,
Drew Ka A. Thompson ,
Katrina Learned ,
A. Geoffrey Lyle ,
Ellen T. Kephart ,
Rob Currie ,
John Vivian ,
Du Linh Lam ,
Lauren Sanders ,
Jacob Pfeil ,
Olena M. Vaske ,
Isabel Bjork
and 3 other authors
Download from academic.oup.com
,
Jacquelyn M. Roger ,
Matthew A. Cattle ,
Liam T. McKay ,
Drew Ka A. Thompson ,
Katrina Learned ,
A. Geoffrey Lyle ,
Ellen T. Kephart ,
Rob Currie ,
John Vivian ,
Du Linh Lam ,
Lauren Sanders ,
Jacob Pfeil ,
Olena M. Vaske ,
Isabel Bjork
and 3 other authors
Download from academic.oup.com
2020
Wesley C. Warren ,
Mao Yafei,
R. Alan Harris ,
Marina and Fiddes Ian T. Haukness ,
Ian T. Fiddes ,
Shwetha C. Murali,
Jason and Dishuck Philip C. Fernandes ,
Philip C. Dishuck ,
Jessica M. Storer ,
Raveendran Muthuswamy,
LaDeana W. Hillier,
David Porubsky,
David Gordon ,
Mitchell R. Vollger ,
Alexandra P. Lewis
and 47 other authors
,
Mao Yafei,
R. Alan Harris ,
Marina and Fiddes Ian T. Haukness ,
Ian T. Fiddes ,
Shwetha C. Murali,
Jason and Dishuck Philip C. Fernandes ,
Philip C. Dishuck ,
Jessica M. Storer ,
Raveendran Muthuswamy,
LaDeana W. Hillier,
David Porubsky,
David Gordon ,
Mitchell R. Vollger ,
Alexandra P. Lewis
and 47 other authors
Sequence diversity analyses of an improved rhesus macaque genome enhance its biomedical utility
Upload
Mariam Okhovat ,
Kimberly A. Nevonen,
Brett A. Davis,
Pryce Michener,
Samantha Ward,
Mark Milhaven,
Lana Harshman,
Ajuni Sohota,
Jason D. Fernandes ,
Sofie R. Salama ,
Rachel J. O’Neill,
Nadav Ahituv ,
Krishna R. Veeramah,
Lucia Carbone
,
Kimberly A. Nevonen,
Brett A. Davis,
Pryce Michener,
Samantha Ward,
Mark Milhaven,
Lana Harshman,
Ajuni Sohota,
Jason D. Fernandes ,
Sofie R. Salama ,
Rachel J. O’Neill,
Nadav Ahituv ,
Krishna R. Veeramah,
Lucia Carbone
Co-option of the lineage-specific LAVA retrotransposon in the gibbon genome
Download from doi.org
Kishwar Shafin ,
Trevor Pesout,
Ryan Lorig-Roach,
Marina Haukness,
Hugh E. Olsen,
Colleen Bosworth,
Joel Armstrong,
Kristof Tigyi,
Nicholas Maurer ,
Sergey Koren ,
Fritz J. Sedlazeck ,
Tobias Marschall ,
Simon Mayes,
Vania Costa,
Justin M. Zook
and 17 other authors
,
Trevor Pesout,
Ryan Lorig-Roach,
Marina Haukness,
Hugh E. Olsen,
Colleen Bosworth,
Joel Armstrong,
Kristof Tigyi,
Nicholas Maurer ,
Sergey Koren ,
Fritz J. Sedlazeck ,
Tobias Marschall ,
Simon Mayes,
Vania Costa,
Justin M. Zook
and 17 other authors
Nanopore sequencing and the Shasta toolkit enable efficient de novo assembly of eleven human genomes
Download from www.nature.com
Jacob Pfeil ,
Lauren M. Sanders,
Ioannis Anastopoulos ,
A. Geoffrey Lyle ,
Alana S. Weinstein ,
Yuanqing Xue ,
Andrew Blair,
Holly C. Beale ,
Alex Lee,
Phuong T. Dinh ,
Stanley G. Leung,
Avanthi Tayi Shah,
Marcus R. Breese,
W. Patrick Devine ,
Isabel Bjork
and 5 other authors
Download from doi.org
,
Lauren M. Sanders,
Ioannis Anastopoulos ,
A. Geoffrey Lyle ,
Alana S. Weinstein ,
Yuanqing Xue ,
Andrew Blair,
Holly C. Beale ,
Alex Lee,
Phuong T. Dinh ,
Stanley G. Leung,
Avanthi Tayi Shah,
Marcus R. Breese,
W. Patrick Devine ,
Isabel Bjork
and 5 other authors
Download from doi.org
2019
Olena M. Vaske,
Isabel Bjork,
Sofie R. Salama ,
Avanthi Tayi Shah,
Holly Beale,
John Vivian,
Lauren Sanders,
Jingchun Zhu,
Ellen T. Kephart,
Jacob Pfeil ,
Rob Currie,
Yulia Newton,
Teresa Swatloski,
Du L. Lam,
Duncan McColl
and 29 other authors
Upload
,
Avanthi Tayi Shah,
Holly Beale,
John Vivian,
Lauren Sanders,
Jingchun Zhu,
Ellen T. Kephart,
Jacob Pfeil ,
Rob Currie,
Yulia Newton,
Teresa Swatloski,
Du L. Lam,
Duncan McColl
and 29 other authors
Upload
Lauren M. Sanders,
Arun Rangaswami,
Isabel Bjork,
Du Linh Lam,
Holly C. Beale,
Ellen Towle Kephart,
Ann Durbin,
Katrina Learned,
Avanthi Tayi Shah,
Rob Currie,
A. Geoffrey Lyle ,
Alex G. Lee,
Jacob Pfeil ,
Stanley G. Leung,
Sheri L. Spunt
and 10 other authors
,
Alex G. Lee,
Jacob Pfeil ,
Stanley G. Leung,
Sheri L. Spunt
and 10 other authors
Comparative RNA-seq analysis aids in diagnosis of a rare pediatric tumor
Upload
Katrina Learned,
Ann Durbin,
Robert Currie ,
Ellen Towle Kephart,
Holly C. Beale,
Lauren M. Sanders,
Jacob Pfeil,
Theodore C. Goldstein,
Sofie R. Salama ,
David Haussler,
Olena Morozova Vaske,
Isabel M. Bjork
,
Ellen Towle Kephart,
Holly C. Beale,
Lauren M. Sanders,
Jacob Pfeil,
Theodore C. Goldstein,
Sofie R. Salama ,
David Haussler,
Olena Morozova Vaske,
Isabel M. Bjork
Barriers to accessing public cancer genomic data
Download from www.nature.com
Alex A. Pollen,
Aparna Bhaduri,
Madeline G. Andrews,
Tomasz J. Nowakowski,
Olivia S. Meyerson,
Mohammed A. Mostajo-Radji,
Elizabeth Di Lullo,
Beatriz Alvarado,
Melanie Bedolli,
Max L. Dougherty,
Ian T. Fiddes,
Zev N. Kronenberg,
Joe Shuga,
Anne A. Leyrat,
Jay A. West
and 7 other authors
Establishing Cerebral Organoids as Models of Human-Specific Brain Evolution
Upload
2018
Jason D. Fernandes,
Armando Zamudio-Hurtado,
Hiram Clawson,
W. James Kent,
David Haussler,
Sofie R. Salama ,
Maximilian Haeussler
Download from link.springer.com
,
Maximilian Haeussler
Download from link.springer.com
Missing publications? Search for publications with a matching author name.