All papers authored by Medhat Mahmoud
Refreshing results…
2023
Sina Majidian,
Daniel Paiva Agustinho,
Chen-Shan Chin,
Fritz J. Sedlazeck,
Medhat Mahmoud 
Genomic variant benchmark: if you cannot measure it, you cannot improve it
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Keiko Akagi,
David E. Symer,
Medhat Mahmoud ,
Bo Jiang,
Sara Goodwin ,
Darawalee Wangsa,
Zhengke Li,
Weihong Xiao,
Joe Dan Dunn ,
Thomas Ried,
Kevin R. Coombes,
Fritz J. Sedlazeck,
Maura L. Gillison
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,
Bo Jiang,
Sara Goodwin ,
Darawalee Wangsa,
Zhengke Li,
Weihong Xiao,
Joe Dan Dunn ,
Thomas Ried,
Kevin R. Coombes,
Fritz J. Sedlazeck,
Maura L. Gillison
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S. Behera,
J. R. Belyeu,
X. Chen,
L. F. Paulin,
N. Q. H. Nguyen,
E. Newman,
M. Mahmoud ,
V. K. Menon,
Q. Qi,
P. Joshi,
S. Marcovina,
M. Rossi,
E. Roller,
J. Han,
V. Onuchic
and 11 other authors
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,
V. K. Menon,
Q. Qi,
P. Joshi,
S. Marcovina,
M. Rossi,
E. Roller,
J. Han,
V. Onuchic
and 11 other authors
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Keiko Akagi,
David E. Symer,
Medhat Mahmoud ,
Bo Jiang,
Sara Goodwin ,
Darawalee Wangsa,
Zhengke Li,
Weihong Xiao,
Joe Dan Dunn ,
Thomas Ried,
Kevin R. Coombes,
Fritz J. Sedlazeck,
Maura L. Gillison
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,
Bo Jiang,
Sara Goodwin ,
Darawalee Wangsa,
Zhengke Li,
Weihong Xiao,
Joe Dan Dunn ,
Thomas Ried,
Kevin R. Coombes,
Fritz J. Sedlazeck,
Maura L. Gillison
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2022
Varuna Chander ,
Medhat Mahmoud ,
Jianhong Hu,
Zain Dardas ,
Christopher M. Grochowski ,
Moez Dawood,
Michael M. Khayat ,
He Li ,
Shoudong Li,
Shalini Jhangiani ,
Viktoriya Korchina,
Hua Shen,
George Weissenberger,
Qingchang Meng ,
Marie‐Claude Gingras
and 8 other authors
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,
Medhat Mahmoud ,
Jianhong Hu,
Zain Dardas ,
Christopher M. Grochowski ,
Moez Dawood,
Michael M. Khayat ,
He Li ,
Shoudong Li,
Shalini Jhangiani ,
Viktoriya Korchina,
Hua Shen,
George Weissenberger,
Qingchang Meng ,
Marie‐Claude Gingras
and 8 other authors
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Kimberly Walker ,
Divya Kalra ,
Rebecca Lowdon,
Guangyi Chen ,
David Molik,
Daniela C. Soto ,
Fawaz Dabbaghie,
Ahmad Al Khleifat,
Medhat Mahmoud ,
Luis F. Paulin ,
Muhammad Sohail Raza,
Susanne P. Pfeifer ,
Daniel Paiva Agustinho,
Elbay Aliyev ,
Pavel Avdeyev
and 44 other authors
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,
Divya Kalra ,
Rebecca Lowdon,
Guangyi Chen ,
David Molik,
Daniela C. Soto ,
Fawaz Dabbaghie,
Ahmad Al Khleifat,
Medhat Mahmoud ,
Luis F. Paulin ,
Muhammad Sohail Raza,
Susanne P. Pfeifer ,
Daniel Paiva Agustinho,
Elbay Aliyev ,
Pavel Avdeyev
and 44 other authors
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Moritz Smolka,
Luis F. Paulin,
Christopher M. Grochowski,
Dominic W. Horner,
Medhat Mahmoud ,
Sairam Behera,
Ester Kalef-Ezra,
Mira Gandhi,
Karl Hong,
Davut Pehlivan,
Sonja W. Scholz,
Claudia M. B. Carvalho,
Christos Proukakis,
Fritz J. Sedlazeck
,
Sairam Behera,
Ester Kalef-Ezra,
Mira Gandhi,
Karl Hong,
Davut Pehlivan,
Sonja W. Scholz,
Claudia M. B. Carvalho,
Christos Proukakis,
Fritz J. Sedlazeck
Comprehensive Structural Variant Detection: From Mosaic to Population-Level
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Yunxi Liu,
Joshua Kearney,
Medhat Mahmoud ,
Bryce Kille,
Fritz J. Sedlazeck ,
Todd J. Treangen
Download from www.nature.com
,
Bryce Kille,
Fritz J. Sedlazeck ,
Todd J. Treangen
Download from www.nature.com
Justin Wagner,
Nathan D. Olson ,
Lindsay Harris,
Jennifer McDaniel,
Haoyu Cheng ,
Arkarachai Fungtammasan,
Yih-Chii Hwang,
Richa Gupta ,
Aaron M. Wenger,
William J. Rowell ,
Ziad M. Khan ,
Jesse Farek,
Yiming Zhu,
Aishwarya Pisupati ,
Medhat Mahmoud
and 22 other authors
,
Lindsay Harris,
Jennifer McDaniel,
Haoyu Cheng ,
Arkarachai Fungtammasan,
Yih-Chii Hwang,
Richa Gupta ,
Aaron M. Wenger,
William J. Rowell ,
Ziad M. Khan ,
Jesse Farek,
Yiming Zhu,
Aishwarya Pisupati ,
Medhat Mahmoud
and 22 other authors
Curated variation benchmarks for challenging medically relevant autosomal genes
Download from www.nature.com
Vipin K. Menon ,
Pablo C. Okhuysen ,
Cynthia L. Chappell,
Medhat Mahmoud ,
Medhat Mahmoud ,
Qingchang Meng,
Harsha Doddapaneni ,
Vanesa Vee,
Yi Han,
Sejal Salvi,
Sravya Bhamidipati,
Kavya Kottapalli,
George Weissenberger,
Hua Shen,
Matthew C. Ross
and 7 other authors
,
Pablo C. Okhuysen ,
Cynthia L. Chappell,
Medhat Mahmoud ,
Medhat Mahmoud ,
Qingchang Meng,
Harsha Doddapaneni ,
Vanesa Vee,
Yi Han,
Sejal Salvi,
Sravya Bhamidipati,
Kavya Kottapalli,
George Weissenberger,
Hua Shen,
Matthew C. Ross
and 7 other authors
Fully resolved assembly of Cryptosporidium parvum
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R. Alan Harris ,
Muthuswamy Raveendran ,
Dustin T. Lyfoung ,
Fritz J. Sedlazeck ,
Medhat Mahmoud ,
Trent M. Prall ,
Julie A. Karl ,
Harshavardhan Doddapaneni ,
Qingchang Meng ,
Yi Han ,
Donna Muzny ,
Roger W. Wiseman ,
David H. O'Connor ,
Jeffrey Rogers
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,
Muthuswamy Raveendran ,
Dustin T. Lyfoung ,
Fritz J. Sedlazeck ,
Medhat Mahmoud ,
Trent M. Prall ,
Julie A. Karl ,
Harshavardhan Doddapaneni ,
Qingchang Meng ,
Yi Han ,
Donna Muzny ,
Roger W. Wiseman ,
David H. O'Connor ,
Jeffrey Rogers
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2021
Jonathan Foox,
Scott W. Tighe ,
Charles M. Nicolet,
Justin M. Zook ,
Marta Byrska-Bishop ,
Wayne E. Clarke,
Michael M. Khayat ,
Medhat Mahmoud ,
Phoebe K. Laaguiby,
Zachary T. Herbert ,
Derek Warner,
George S. Grills,
Jin Jen,
Shawn Levy ,
Jenny Xiang
and 12 other authors
Download from www.nature.com
,
Charles M. Nicolet,
Justin M. Zook ,
Marta Byrska-Bishop ,
Wayne E. Clarke,
Michael M. Khayat ,
Medhat Mahmoud ,
Phoebe K. Laaguiby,
Zachary T. Herbert ,
Derek Warner,
George S. Grills,
Jin Jen,
Shawn Levy ,
Jenny Xiang
and 12 other authors
Download from www.nature.com
Medhat Mahmoud ,
Harshavardhan Doddapaneni,
Winston Timp,
Fritz J. Sedlazeck
,
Harshavardhan Doddapaneni,
Winston Timp,
Fritz J. Sedlazeck
PRINCESS: comprehensive detection of haplotype resolved SNVs, SVs, and methylation
Download from link.springer.com
Ann M. Mc Cartney ,
Medhat Mahmoud ,
Michael Jochum,
Daniel Paiva Agustinho,
Barry Zorman,
Ahmad Al Khleifat,
Fawaz Dabbaghie,
Rupesh K. Kesharwani,
Moritz Smolka,
Moez Dawood,
Dreycey Albin,
Elbay Aliyev,
Hakeem Almabrazi,
Ahmed Arslan,
Advait Balaji
and 47 other authors
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,
Medhat Mahmoud ,
Michael Jochum,
Daniel Paiva Agustinho,
Barry Zorman,
Ahmad Al Khleifat,
Fawaz Dabbaghie,
Rupesh K. Kesharwani,
Moritz Smolka,
Moez Dawood,
Dreycey Albin,
Elbay Aliyev,
Hakeem Almabrazi,
Ahmed Arslan,
Advait Balaji
and 47 other authors
Upload
Ann M. Mc Cartney ,
Medhat Mahmoud ,
Michael Jochum ,
Daniel Paiva Agustinho ,
Barry Zorman,
Ahmad Al Khleifat,
Ahmad Al Khleifat,
Fawaz Dabbaghie,
Rupesh K. Kesharwani,
Rupesh K. Kesharwani,
Moritz Smolka ,
Moez Dawood,
Dreycey Albin,
Elbay Aliyev ,
Hakeem Almabrazi
and 57 other authors
Download from doi.org
,
Medhat Mahmoud ,
Michael Jochum ,
Daniel Paiva Agustinho ,
Barry Zorman,
Ahmad Al Khleifat,
Ahmad Al Khleifat,
Fawaz Dabbaghie,
Rupesh K. Kesharwani,
Rupesh K. Kesharwani,
Moritz Smolka ,
Moez Dawood,
Dreycey Albin,
Elbay Aliyev ,
Hakeem Almabrazi
and 57 other authors
Download from doi.org
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