Denis Thieffry - Dissemin

All papers authored by Denis Thieffry

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2015 Åsmund Flobak, Anaïs Baudot, Elisabeth Remy, Liv Thommesen, Denis Thieffry, Martin Kuiper, Astrid Lægreid

Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling

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Chris van Oevelen, Samuel Collombet, Guillermo Vicent, Maarten Hoogenkamp, Cyrille Lepoivre, Aimee Badeaux, Lars Bussmann, Jose Luis Sardina, Denis Thieffry, Miguel Beato, Yang Shi, Constanze Bonifer

, Thomas Graf

C/EBPα Activates Pre-existing and De Novo Macrophage Enhancers during Induced Pre-B Cell Transdifferentiation and Myelopoiesis

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Wassim Abou-Jaoudé, Jérôme Feret, Denis Thieffry

Derivation of Qualitative Dynamical Models from Biochemical Networks

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2014 Pedro T. Monteiro

, Wassim Abou-Jaoudé, Denis Thieffry, Claudine Chaouiya, Monteiro Pedro

Model Checking logical regulatory networks

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Anna Niarakis, Yacine Bounab, Luca Grieco, Romain Roncagalli

, Anne-Marie Hesse

, Jerome Garin, Bernard Malissen

, Marc Daëron, Denis Thieffry

Computational Modeling of the Main Signaling Pathways Involved in Mast Cell Activation

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2013 Jose Luis Sardina, Bruno 1984 Di Stefano, Chris van Oevelen, Eric M. Kallin, Samuel Collombet, Guillermo P. Vicent, Jun Lu, Denis Thieffry, Miguel Beato, Thomas Graf

C/EBPα poises B cells for rapid reprogramming into induced pluripotent stem cells

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Luca Grieco, Laurence Calzone, Isabelle Bernard-Pierrot, FranÃ§ois Radvanyi, Brigitte Kahn-Perlã¨s, Denis Thieffry

Correction: Integrative Modelling of the Influence of MAPK Network on Cancer Cell Fate Decision

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Luca Grieco, Laurence Calzone, Isabelle Bernard-Pierrot, FranÃ§ois Radvanyi

, Brigitte Kahn-Perlã¨s, Denis Thieffry

Integrative Modelling of the Influence of MAPK Network on Cancer Cell Fate Decision

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Yacine Bounab, Anne-Marie Hesse

, Bruno Iannascoli, Luca Grieco, Yohann Couté, Anna Niarakis, Romain Roncagalli

, Eunkyung Lie, Kong-Peng Lam, Caroline Demangel, Denis Thieffry, Jerome Garin, Bernard Malissen

, Marc Daëron

Proteomic Analysis of the SH2Domain-containing Leukocyte Protein of 76 kDa (SLP76) Interactome*

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Morgane Thomas-Chollier, Matthieu Defrance, Olivier Sand, Carl Herrman, Denis Thieffry, Van Helden Jacques

RSAT peak-motifs: Efficient prediction of transcription factor motifs and binding sites from genome-wide sequencing peak sets

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Jean-Paul Jp Comet, Mathilde M. Noual, Adrien Richard, Julio J. Aracena, Laurence Calzone, Jacques Demongeot, Marcelle Kaufman, Aurélien Naldi, El Houssine Snoussi, Denis Thieffry

On Circuit Functionality in Boolean Networks

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Abibatou Mbodj, Guillaume Junion, Christine Brun, Eileen E. M. Furlong, Denis Thieffry

Logical modelling of Drosophila signalling pathways

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Claudine Chaouiya, Duncan Bérenguier, Sarah M. Keating, Aurélien Naldi, Martijn P. van Iersel, Nicolas Rodriguez, Martijn Van Iersel, Andreas Dräger

, Finja Büchel, Thomas Cokelaer, Bryan Kowal, Benjamin Wicks, Emanuel Gonçalves, Julien Dorier, Michel Page and 11 other authors

SBML qualitative models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools

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Adrien Fauré, Denis Thieffry

Cell Cycle Modeling Using Logical Rules

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Elodie Darbo, Carl Herrmann, Thomas Lecuit, Denis Thieffry, Jacques van Helden

Transcriptional and epigenetic signatures of zygotic genome activation during early drosophila embryogenesis

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2012 Morgane Thomas-Chollier, Elodie Darbo, Carl Herrmann, Matthieu Defrance, Denis Thieffry, Jacques van Helden

A complete workflow for the analysis of full-size ChIP-seq (and similar) data sets using peak-motifs

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Marion Coolen, Denis Thieffry, Øyvind Drivenes, O. Drivenes, Thomas S S. Becker, Laure Bally-Cuif

miR-9 Controls the Timing of Neurogenesis through the Direct Inhibition of Antagonistic Factors

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Morgane Thomas-Chollier, Jacques van Helden, Matthieu Defrance, Olivier Sand, Carl Herrmann, Denis Thieffry, Jacques Van Helden

RSAT peak-motifs: fast extraction of transcription factor binding motifs from full-size ChIP-seq datasets

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Fabien Corblin, Eric Fanchon, Laurent Trilling, Claudine Chaouiya, Denis Thieffry

Automatic Inference of Regulatory and Dynamical Properties from Incomplete Gene Interaction and Expression Data

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2011 Morgane Thomas-Chollier, Carl Herrmann, Matthieu Defrance, Olivier Sand, Denis Thieffry, Jacques van Helden

RSAT peak-motifs: motif analysis in full-size ChIP-seq datasets

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All papers authored by Denis Thieffry