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All papers authored by Steven Kelly

This paper is made freely available by the publisher.

2020 Adrian M. Altenhoff

ORCID

, Javier Garrayo-Ventas

ORCID

, Salvatore Cosentino

ORCID

ORCID

, Natasha M. Glover

ORCID

, Ana Hernández-Plaza, Yannis Nevers

ORCID

, Vicky Sundesha

ORCID

, Damian Szklarczyk, José M. Fernández

ORCID

ORCID

, the Quest for Orthologs Consortium, Josep Ll Gelpi

ORCID

, Jaime Huerta-Cepas

ORCID

, Wataru Iwasaki

ORCID

and 8 other authors

The Quest for Orthologs benchmark service and consensus calls in 2020

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2019 Pablo Muñoz-Rodríguez

ORCID

, Tom Carruthers, John R. I. Wood, Bethany R. M. Williams, Kevin Weitemier

ORCID

, Brent Kronmiller, Zoë Goodwin, Alex Sumadijaya, Noelle L. Anglin, Denis Filer, David Harris

ORCID

, Mark D. Rausher

ORCID

, Steven Kelly

ORCID

, Aaron Liston, Robert W. Scotland

ORCID

A taxonomic monograph of Ipomoea integrated across phylogenetic scales

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This paper was not found in any repository, but could be made available legally by the author.

2018 Rona Costello

ORCID

, David M. Emms

ORCID

, Steven Kelly

ORCID

Gene duplication accelerates the pace of protein gain and loss from plant organelles.

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This paper was not found in any repository; the policy of its publisher is unknown or unclear.

David M. Emms

ORCID

, Steven Kelly

ORCID

STAG: Species Tree Inference from All Genes

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This paper is available in a repository.

Janaina de Freitas Nascimento

ORCID

, Steven Kelly

ORCID

ORCID

, Mark Carrington

ORCID

Codon choice directs constitutive mRNA levels in trypanosomes

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This paper is made freely available by the publisher.

2017 Peng Wang

ORCID

, Shanta Karki, Akshaya K. Biswal

ORCID

, Hsiang-Chun Lin, Mary Jacqueline Dionora, Govinda Rizal, Xiaojia Yin, Mara L. Schuler, Tom Hughes, Jim P. Fouracre, Basel Abu Jamous, Olga Sedelnikova

ORCID

, Shuen-Fang Lo, Anindya Bandyopadhyay, Su-May Yu and 3 other authors

Candidate regulators of Early Leaf Development in Maize Perturb Hormone Signalling and Secondary Cell Wall Formation When Constitutively Expressed in Rice

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David M. Emms

ORCID

, Steven Kelly

ORCID

STRIDE: Species Tree Root Inference From Gene Duplication Events

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Mark Carrington, Eva Dóró, Maria Forlenza

ORCID

, Geert F. Wiegertjes

ORCID

, Steven Kelly

ORCID

Transcriptome Sequence of the Bloodstream Form of Trypanoplasma borreli , a Hematozoic Parasite of Fish Transmitted by Leeches

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2016 Emily A. Seward, Steven Kelly

ORCID

Dietary nitrogen alters codon bias and genome composition in parasitic microorganisms

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2015 Govinda Rizal, Vivek Thakur, Jacqueline Dionora, Shanta Karki, Samart Wanchana, Kelvin Acebron, Nikki Larazo, Richard Garcia, Abigail Mabilangan, Florencia Montecillo, Florence Danila, Reychelle Mogul, Paquito Pablico, Hei Leung, Jane A. Langdale and 3 other authors

Two forward genetic screens for vein density mutants in sorghum converge on a Cytochrome P450 gene in the brassinosteroid pathway

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David M. Emms

ORCID

, Steven Kelly

ORCID

OrthoFinder: solving fundamental biases in whole genome comparisons dramatically improves orthogroup inference accuracy

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Yuki Yasumura, Ronald Pierik

ORCID

, Steven Kelly

ORCID

, Masaaki Sakuta

ORCID

, Laurentius A. C. J. Voesenek, Nicholas P. Harberd

ORCID

An Ancestral Role for CONSTITUTIVE TRIPLE RESPONSE1 Proteins in Both Ethylene and Abscisic Acid Signaling

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Richard D. Smith-Unna

ORCID

, Chris Boursnell

ORCID

ORCID

, Julian M. Hibberd

ORCID

, Steven Kelly

ORCID

TransRate: reference free quality assessment of de-novo transcriptome assemblies

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Steven Kelly

ORCID

, Theodore Georgomanolis, Anne Zirkel, Sarah Diermeier, Dawn O'Reilly, Shona Murphy, Gernot Längst, Peter R. Cook, Argyris Papantonis

Splicing of many human genes involves sites embedded within introns

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This paper is available in a repository.

Steven Kelly

ORCID

, Chris Greenman, Peter R. Cook, Argyris Papantonis

Exon Skipping Is Correlated with Exon Circularization

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2014 Michael Fiebig, Eva Gluenz, Mark Carrington, Steven Kelly

ORCID

SLaP mapper: A webserver for identifying and quantifying spliced-leader addition and polyadenylation site usage in kinetoplastid genomes.

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Steven Kelly

ORCID

, Alasdair Ivens, Paul T. Manna, Wendy Gibson, Mark C. Field

A draft genome for the African crocodilian trypanosome Trypanosoma grayi

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Sylvain Aubry, Steven Kelly

ORCID

, Britta M. C. Kümpers

ORCID

, Richard D. Smith-Unna

ORCID

, Julian M. Hibberd

Deep Evolutionary Comparison of Gene Expression Identifies Parallel Recruitment of Trans-Factors in Two Independent Origins of C4 Photosynthesis

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Thomas E. Hughes, Jane A. Langdale, Steven Kelly

ORCID

The impact of widespread regulatory neofunctionalization on homeolog gene evolution following whole-genome duplication in maize

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Fay-Wei Li, Juan Carlos Villarreal, Steven Kelly

ORCID

, Carl J. Rothfels, Michael Melkonian, Eftychios Frangedakis, Markus Ruhsam

ORCID

, Erin M. Sigel, Joshua P. Der

ORCID

, Jarmila Pittermann, Dylan O. Burge, Lisa Pokorny, Anders Larsson, Tao Chen, Stina Weststrand and 21 other authors

Horizontal transfer of an adaptive chimeric photoreceptor from bryophytes to ferns

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