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Oxford University Press, Nucleic Acids Research, Web Server(38), p. W78-W83, 2010

DOI: 10.1093/nar/gkq482

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R spider: a network-based analysis of gene lists by combining signaling and metabolic pathways from Reactome and KEGG databases

Journal article published in 2010 by Alexey V. Antonov, Esther E. Schmidt, Sabine Dietmann, Maria Krestyaninova, Henning Hermjakob
This paper is made freely available by the publisher.
This paper is made freely available by the publisher.

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Abstract

R spider is a web-based tool for the analysis of a gene list using the systematic knowledge of core pathways and reactions in human biology accumulated in the Reactome and KEGG databases. R spider implements a network-based statistical framework, which provides a global understanding of gene relations in the supplied gene list, and fully exploits the Reactome and KEGG knowledge bases. R spider provides a user-friendly dialog-driven web interface for several model organisms and supports most available gene identifiers. R spider is freely available at http://mips.helmholtz-muenchen.de/proj/rspider.