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Additional file 10

Dataset published in 2012 by Kristof De Beuf, Joachim De Schrijver, Olivier Thas, Wim Van Criekinge, Rafael A. Irizarry, Lieven Clement
This paper was not found in any repository; the policy of its publisher is unknown or unclear.
This paper was not found in any repository; the policy of its publisher is unknown or unclear.

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Abstract

Comparison of mapping mismatches. Percentage of reads with different numbers of mismatches in the mapping between the reads produced by either HPCall or the native 454 base-caller and the E. coli K-12 reference sequence. For mapping either ssaha2 or subread is used. Detected number of sequence variants for the E. coli data set using ssahaSNP. HPCall results in more perfect-matching reads and less overall indels and SNPs.