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Wiley, Journal of Mass Spectrometry, 8(58), 2023

DOI: 10.1002/jms.4965

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Optimization of reversed‐phase solid‐phase extraction for shotgun proteomics analysis

Journal article published in 2023 by Fanni Bugyi, Lilla Turiák, László Drahos ORCID, Gábor Tóth ORCID
This paper was not found in any repository, but could be made available legally by the author.
This paper was not found in any repository, but could be made available legally by the author.

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Abstract

AbstractReversed‐phase solid‐phase extraction (SPE) is the method of choice for the purification of proteomics samples. Even though the efficacy of SPE methods is sample type‐dependent, the manufacturers' protocols are used in most studies. Using an optimized SPE method can lead to a substantial gain in identification and recovery. In this tutorial, we give a brief introduction to the most important parameters influencing SPE performance, and we present a short workflow (16 measurements) for optimizing the SPE procedure. This is complemented by method performance assessment instructions and a short troubleshooting guide to help users further understand and investigate their SPE methods.